osdc-2023-assignment1

I just started OSDC 2023 course with @szabgab OSDC and here is my first assignment:

This is my github

This is my Gitlab

I chose baby yoda as my profile picture because me and my family like watching Star Wars movies together, and I like the idea of a small guy who is more than meets the eye..

A little about me

-I am a bioinformatician and I love biology.

-I program mainly in R, Python and Shell.

-Here are some packages I use:

• Biopython

• Fittetra

• CrispRVariants

• dplyr

• ggplot2

• stringr

-What do I want to accomplish in this course?
First to learn and enjoy. Than to gain practical knowledge that will improve my daily work.

-Which open source projects would you like to contribute to?
Maybe one of the above I mentioned, still need to think about it.

Time investment:

1.5 hour for: open gitLab account, define participants json, create dev account, update linkedin url, send pull request, update github and dev profile picture.
1 hour for: write the blog, fixing pull requests issues.
1 hour for: find github for corporations and universities, update the blog.

a note about a pull request:
pull request
As my gitlab user name was not corrected in the json file, there was a special test just for me in the test_json.py file. after updating the username in the json file I had also to update the match regex that finds the username to also include a dot, as my user name 'anat.lavitz' contains a dot.

What are friends for?
Here is a link to my team mate Shuly and her post:
blog1

blog2

updating the corporations repos with 3 sequencing companies:
Illumina
nanopore
Pacbio
This is the pull request:
pull request

and the non-profit repo with the Broad institute git:
Broad Institute
This is the pull request:
pull request