caMicroscope Distribution

caMicroscope 3.X distribution

dont forget to clone https://github.com/lokimonoton/caMicroscope run with docker-compose -f panda.yml up

this will build all services and run in the foreground Use docker-compose -f panda.yml build to rebuild the services.

Once everything is up, go to :4010/ to see the landing page.

SSL

To enable ssl, mount the private key and certificate files to the security service in /root/src/ssl/privatekey.pem and /root/src/ssl/certificate.pem respectively. HTTPS mode will only be enabled if both of these files are present.

Component Services

mongo - vanilla mongo container

idxMongo - ephemeral container to index mongo (that is, this container is expected to exit once it's done its job)

bindaas - api service for mongo (see https://github.com/sharmalab/bindaas)

iip - slide tile server (see https://github.com/camicroscope/iipImage)

viewer - hosts the viewer files and builds packages ( see https://github.com/camicroscope/caMicroscope)

loader - extracts metadata needed for image loading (see https://github.com/camicroscope/SlideLoader)

security -…