Well, that there's no saying you must put the issues in the same repository. Because it's just a file, you could track it in another repository, a cloud share, whatever works for your team.
I think you bring up a good point: comments and logs. That makes me think that this is beyond one file. We could use hashes to associate issues with individual files for comments (organized in a dedicated directory), so those won't become merge conflicts.
As I mentioned, I'll build a front-end for this - an application GUI, a CLI interface, and a VSCode plugin. That'll offer the search, browse, and modify tools.
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Well, that there's no saying you must put the issues in the same repository. Because it's just a file, you could track it in another repository, a cloud share, whatever works for your team.
I think you bring up a good point: comments and logs. That makes me think that this is beyond one file. We could use hashes to associate issues with individual files for comments (organized in a dedicated directory), so those won't become merge conflicts.
As I mentioned, I'll build a front-end for this - an application GUI, a CLI interface, and a VSCode plugin. That'll offer the search, browse, and modify tools.